7. Discovery and exploitation of fluorescent dyes in healthcare, drug discovery and life sciences
Submitting Institution
Cardiff UniversityUnit of Assessment
Clinical MedicineSummary Impact Type
TechnologicalResearch Subject Area(s)
Chemical Sciences: Inorganic Chemistry
Biological Sciences: Biochemistry and Cell Biology, Genetics
Summary of the impact
    Cardiff University research in 1997-2008 resulted in the development of a
      family of novel far-red fluorescent dyes that stain the DNA of cells. The
      leading live cell dye DRAQ5™ is now utilised in a wide range of laboratory
      assays, transforming practice in clinical, commercial and research
      sectors. Smith co-founded the multi-award-winning start-up company
      Biostatus Ltd in 2001 to undertake product development. Commercial impact
      post-2008 has been the generation of over $3.2 million in sales revenue
      enabling job creation, direct funding of UK academic research positions
      and creation of new technology start-up companies. Used in over 3,500
      research, pharmaceutical and clinical organisations, DRAQ™ technology has
      global reach.
    Underpinning research
    Research on an unmet need: The study of cells and tissues
      frequently utilizes fluorescent reagents, in particular dyes that can
      stain nuclear DNA. Live cell DNA-specific dyes are especially valuable
      since they can indicate cell cycle stage while at the same time preserving
      cell function. Combining a live cell dye with other fluorescent tags
      enhances `multi-colour' analyses on a range of cell imaging and cytometry
      instruments. Such analyses encompass a wide range of clinical and
      biomedical laboratory assays in research, diagnostic testing and
      high-throughput screens. Before 2001, the choice of live cell dyes was
      highly restricted and required an expensive UV laser for detection or
      visualisation. Cardiff research focused on this unmet need.
    Research at Cardiff University led by Paul Smith (Professor of Cancer
      Biology; 1995-2013) had discovered the complex intracellular far-red
      fluorescence patterns of drug-like anthraquinone molecules3.1.
      In 1997 Smith initiated the underpinning research, funded by the MRC and
      the Joint Research Equipment Initiative, to explore new molecular probes
      for use in the life sciences. Paul Smith developed a new class of
      anthraquinone-based DNA binding dyes that could penetrate into the nucleus
      of living cells, undergo excitation by low cost red-emitting (633 nm)
      lasers and fluoresce in the `far red' region of the spectrum. This
      distinguished them from commonly used visible range fluorescent, making
      them valuable in a wide range of biomedical applications.
    Generating and screening candidate dyes: The research
      involved the design of dye molecules with rapid penetration and high
      binding affinity but with low quantum yield to decrease the `noise' from
      unbound molecules. In collaboration with Laurence Patterson (Professor;
      School of Pharmacy, De Montfort University), Paul Smith selected various
      anthraquinone structures that were synthesised by Patterson and
      transferred to Cardiff University for all subsequent research. During
      1997-2000 Paul Smith utilized cell based imaging and flow cytometry, early
      on discovering an optimal dye DRAQ5™ capable of entering living cells
      (from microbes to human tissues) within seconds3.2,3.3. A
      further breakthrough was the discovery that DRAQ5™ could also be excited
      by conventional blue (488 nm) lasers making it compatible with all flow
      cytometry platforms3.2 - a feature not shared by any other
      vital DNA dye.
    Applications, funding & intellectual property:
      From 2000-2008, basic research at Cardiff University by Paul Smith and
      Rachel Errington (Research Fellow, 1998-2003; Lecturer & Senior
      Lecturer 2003-2011; Reader 2011; Professor 2013-present) created multiple
      applications for this new class of dye molecules in the life sciences
      including: lab-on-a-chip applications3.4 funded by Research
      Councils UK, Optical Biochips Basic Technology Programme (2003-2007), high
      resolution timelapse multiphoton imaging3.5 funded by the
      Association for International Cancer Research (2000-2003), monitoring
      drug-DNA targeting and high-content-screening assays funded by the BBSRC
      (2003-2006 & 2007-2008). Industrial research partnerships between the
      Cardiff team, Amersham Biosciences PLC & Kinetic Imaging Ltd
      (2000-2003) established DRAQ5 dye compatibility in cell-based assays using
      green fluorescent proteins3.6. Cardiff-Biostatus Ltd
      partnerships [BBSRC Small Business Research Initiative grant (2003-2005)
      & CASE/EPSRC Studentship (2005-8)] led to the further development of
      anthraquinone-based dye molecules (including CyTrak™Orange, ApoTrak™ and
      DRAQ7™) for commercialisation by BioStatus Ltd. The underlying and linked
      research has generated over £4m of research income. The core technology is
      protected by US-granted patents (see below) citing Cardiff University's
      published research.
    References to the research
    
3.1 Smith PJ, Desnoyers, R., Blunt, N., et al Flow
      cytometric analysis and confocal imaging of anticancer
      alkylaminoanthraquinones and their N-oxides in intact human cells using
      647-nm krypton laser excitation. Cytometry 1997;27:43-53 DOI:
      10.1002/(SIci)1097- 0320(19970101)27:1<43::AID-CYTO6>3.0.CO:2M
     
3.2 Smith PJ, Wiltshire, M., Davies, S., et al. A novel
      cell permeant and far red-fluorescing DNA probe, DRAQ5, for blood cell
      discrimination by flow cytometry. J Immunol Methods 1999;229:131-9
      DOI: 10.1016/S0022-1759(99)00116-7
     
3.3 Smith PJ, Blunt, N., Wiltshire M., et al
      Characteristics of a novel deep red/infrared fluorescent cell-permeant DNA
      probe, DRAQ5, in intact human cells analyzed by flow cytometry, confocal
      and multiphoton microscopy. Cytometry 2000;40:280-91 DOI:
      10.1002/1097- 0320(20000801)40:4<280::AID-CYTO4>3.0.CO:2-7
     
3.4 Njoh KL, Patterson LH, Zloh M, Wiltshire M, Fisher J, Chappell S,
      Ameer-Beg S, Bai Y, Matthews D, Errington RJ, Smith PJ. Spectral
      analysis of the DNA targeting bisalkylaminoanthraquinone DRAQ5 in intact
      living cells. Cytometry A 2006;69:805-14 DOI: 10.1002/cyto.a.20308
     
3.5 Errington RJ, Ameer-beg SM, Vojnovic B et al.
      Advanced microscopy solutions for monitoring the kinetics and dynamics of
      drug-DNA targeting in living cells. Adv Drug Deliv Rev
      2005;57:153-67 DOI: 10.1016/j.addr.2004.05.005
     
3.6 Smith PJ, Marquez, N., Wiltshire, M., et al. Mitotic bypass
      via an occult cell cycle phase following DNA topoisomerase II inhibition
      in p53 functional human tumor cells. Cell Cycle 2007;6:2071-81
      DOI: 10.4161/cc.6.16.4585
     
Linked research funding 1996-2008
    • 1996-1999. MRC Project Grant G9526470. Development and
      evaluation of novel flow cytometric assays for anticancer drug induced
      cell cycle arrest. £220,000. PJ Smith (PI).
    • 1997-2000. MRC/HEFCW Joint Research Equipment Initiative. Two
      photon confocal imaging. AK Campbell (PI) & PJ Smith £535,428.
    • 2000-2003. Association for International Cancer Research:
      Research (AICR) Grant ref: 00- 292. Title. High resolution timelapse
      multiphoton imaging of anticancer drugs in living tumour cells: linking
      single cell pharmacokinetics, tumour cell responses and treatment design
      through bioinformatics. PJ Smith (PI) & RJ Errington & T Hoy. £115,771.
    • 2000-2003. Amersham Biosciences PLC/Kinetic Imaging Ltd:
      Research Grant. Cell-based assay development. PJ Smith (PI) & RJ
      Errington. £123,000.
    • 2003-2005. BBSRC Research Grant SBRI19666. Far-red fluorescent
      dyes and novel delivery/detection systems for high throughput screening
      (HTS) and cell-based biotechnology. PJ Smith (PI). £182,000.
    • 2003-2006. BBSRC Grant 75/E19292. The biology of drug
      targeting: Predictive mathematical modelling of drug impact in complex and
      dynamic cell populations. PJ Smith (PI) & RJ Errington. £177,392.
      (A grade evaluation).
    • 2003-2007. Research Councils' UK Basic Technology Research
      Programme Grant GR/S23483: Optical biochips. PJ Smith (PI), P Blood, SM
      Ameer-Beg, PM Smowton, H Summers, B Vojnovic, RJ Errington, D Westwood, J
      Burt, DM Taylor , £2,271,606.
    • 2005-2008. Biostatus Ltd/Cardiff University EPSRC CASE Award
      RAUU001. Genomic and cell-based evolution of molecular oncotherapeutics.
      PJ Smith (PI) & RJ Errington, £48,257.
    • 2007. EPSRC HS-LSI feasibility grant EP/E013104/1: Stroboscopic
      excitation fluorescence lifetime imaging. RJ Errington (PI). £103,000.
    • 2007-2008. BBSRC Research Equipment Initiative Grant
      BB/E012574/1. Time-based high- content screening. RJ Errington (PI) and PJ
      Smith. £ 242,000.
    Details of the impact
    Commercial Impact Of New Business Creation With Established Viability:
    Background: The invention of DRAQ5™ led to the creation in
      2001 of BioStatus Ltd (by Smith, Patterson and CEO Stefan Ogrodzinski; http://www.biostatus.com/aboutus.asp)
      to co-develop the dye technology, gain world-wide patent protection and
      develop a route for sustainable commercial impact. A significant outcome
      was the creation of a new market for far-red molecular probes (primary and
      commercially-sensitive corroboration information from BioStatus Ltd CEO;
      Factual Statement)5.1,5.2. Between 2002 and 2008, BioStatus Ltd
      engaged academic opinion leaders and commercial organisations with a focus
      on flow cytometry - winning two New Technologies Initiative Awards
      in 2005 and funding research at 4 UK universities (Cardiff, Swansea,
      Nottingham and Bradford). By 2009 BioStatus Ltd had secured granted DRAQ
      patents5.3. Biostatus Ltd remains privately owned and in 2009
      moved its direct sales and product development operations into its own
      2,500 sq ft office & laboratory facility in Shepshed, Leicestershire5.1.
    New product commercialized with revenue generation: In the
      impact period, DRAQ5™ alone has an accumulated earnings of $3.2m, >95%
      arising from export income, returning royalties of >$180K5.1,5.2
      with a conservative estimate of ~5 million sample assays performed
      to-date.
    New linked start-ups funded by revenue from the core dye technology:
      In 2008 Biostatus Ltd created Biosuspensions Ltd (www.biosuspensions.com
      Register No.06780280) to progress its new drug and probe delivery
      technology and in 2009 created the award-winning Oncotherics Ltd (www.oncotherics.com;
      Register No.06940617) to progress a new anticancer drug based on its
      accumulated company expertise in molecular probe chemistry.
    Global reach of the innovation: To extend commercial global
      reach, from 2008 BioStatus established a widening network of key
      distributors including: ThermoFisher (2009-), e-Bio (now Affymetrix;
      2009-) and AbCam (2010-). By 2013, the reach of the technology to its
      research constituency was evidenced by its incorporation into research
      practice world-wide in over 500 academic centres (source: client
      management database Biostatus Ltd)5.1,5.2. By March 2013 the
      widening significance and intensity of the influence of DRAQ5™ was
      evidenced by its application featuring in 158 peer-reviewed articles (101
      post-2008; source: SCOPUS) and a wider referencing of the use of DRAQ5™ as
      a standard reagent in 3,060 text articles (2,340 post-2008; source: Google
      Scholar). More recently, by October 2013 SCOPUS reported 925 Journal
      references for DRAQ5™ and 338 patent applications exploiting DRAQ
      technology published world-wide.
    Recognition of impact: Successful translation of research
      through to product impact was recognised by the award of the 2012
        Royal Society of Chemistry Teamwork in Innovation Award to Smith,
      Patterson, Errington and Biostatus Ltd, "For worldwide exploitation and
      impact of novel fluorescent molecular probes and cell detection
      technologies in drug discovery, clinical diagnostics & the life
      sciences"  5.4.
    Job creation: BioStatus Ltd is an ISO 9001 company,
      currently employs 8 people and supports employment indirectly though
      contracted activities for legal, synthesis and business support services5.1,5.2.
    Impact On Business And New Medicines Discovery Sector Through Adoption
        Of A New Technology:
    Early partnerships with antibody suppliers (Cell Signalling Technologies
      Inc, USA;www.cellsignal.com), major instrument developers (Amnis
      Corporation; now EMD Millipore) and high-throughput assay developers
      (Norak Biosciences, USA) led to validation for multi-colour microscopy and
      imaging cytometry with product adoption by March 20085.1,5.2.
    DRAQ5™ (product overview video: http://www.biostatus.com/SearchResults.asp?Cat=1889)
      is now used extensively on discovery imaging platforms with beneficiaries
      being: GlaxoSmithKline, the world's leading pharmaceutical company (GSK
      ranks #1, in the 2012 Access to Medicine Index), other major drug
      companies (Roche, Bayer Schering & Takeda/Nycomed) and contract
      high-throughput screening organisations (eg Odyssey Thera) involved in new
      medicine development for pharmaceutical clients. Here the commercial
      impact has been a simplification of cell identification routines in
      imaging-based screens, cost-reduction/well, verified compatibility with
      multiple green fluorescent protein reporter-based assays3.6 and
      reduced attrition of naturally fluorescent drug candidates in screens5.1.
    Impact On Health Through Delivering Improvements To The Analysis Of
        Cells
    New reagents for clinical diagnostics: DRAQ technology has
      had the impact of delivering improvements to the accuracy of diagnostic
      assays in a wide range of flow cytometry applications while providing
      previously unattainable information or cost-savings in work flows. An
      early trial in 2004 showed that DRAQ™ technology was readily adoptable by
      regional flow cytometry clinical laboratory services employing cost-saving
      and automated cytometers5.5. DRAQ5 is a validated reagent in
      multiple applications, typical examples are: improved rare cell detection
      in clinical diagnosis5.6, 5.7, more accurate myeloid to
      erythroid precursors ratio determinations and a simplified workflow in
      bone marrow analysis for haemato-oncology5.8, and improved
      detection of nucleated erythroblasts5.9.
    Evidence of widespread adoption in clinical assays: DRAQ5™
      is featured directly in 29 independent medical publications (source:
      SCOPUS search < DRAQ5>) providing evidence of the role of DRAQ5™ in
      improving different clinical assays as a generic probe but for multiple
      cell types - typical examples being: DRAQ5™ permitting the optimization of
      multi-colour approaches for the clinical analysis of cancer cells, DRAQ5™
      increasing the speed of assays by allowing single-step processing of
      clinical samples such as bone marrow aspirates, DRAQ5™ simplifying assays
      by allowing nucleated cells to be identified in blood and bone marrow
      samples. Further DRAQ5™ introduces a new cell descriptor to enhance
      accuracy of diagnosis in lymphoproliferative disorders and plasma cell
      neoplasias. DRAQ5™ enables for the first time the simple extraction of
      proliferation index of specific bone marrow cell compartments - an
      important feature linked to patient outcomes. The core technology also
      encompasses new derivatives. For example DRAQ7 detects cell viability and
      is to be supplied in 2013 as a validated probe5.10 by Beckman
      Coulter Inc - a leading in vitro diagnostics flow cytometry company. DRAQ7
      is being evaluated further for an improved version of the ISHAGE protocol
      for Paroxysmal Nocturnal Hemoglobinuria diagnostics and for the
      standardization of flow cytometry for myelodysplastic syndromes.
    Sources to corroborate the impact 
    5.1 Factual Statement: CEO Biostatus Ltd (Provides corroboration
      of company activities)
    5.2 Contact Person: CEO BioStatus Limited (Source corroboration
      of financial and client information)
    5.3 Combined pdf document of US patents: 6,468,753 2002;
      7,060,427 2006; 7,605,280 2009: Smith PJ, Patterson LH; BioStatus Limited,
      assignee; title: Anthraquinone and its derivatives (backs up claims of
      commercial impact). <http://patft.uspto.gov/netacgi/nph-Parser?Sect1=PTO2&Sect2=HITOFF&p=1&u=%2Fnetahtml%2FPTO%2Fsearch-bool.html&r=0&f=S&l=50&TERM1=Anthraquinone+and+its+derivatives&FIELD1=TI&co1=AND&TERM2=Biostatus&FIELD2=ASNM&d=PTXT>
    5.4 Scientific Organisation website:
      http://www.rsc.org/ScienceAndTechnology/Awards/TeamworkinInnovation/2012-Winner.asp
      (backs up claims of recognition of impact)
    5.5 Research document: Luider J, Cyfra M, Johnson P & Auer I.
      Lab Hematol. 2004;10(2):102-8 (backs up claims of new reagents for
      clinical diagnosis).
    5.6 Research document: Kraan, J., et al. Journal of Thrombosis
      and Haemostasis 10.5 (2012): 931-939 (backs up claims of new reagents for
      clinical diagnosis).
    5.7 Research document: Swerts, K., et al. Clinica chimica acta
      379.1 (2007): 154-157 (backs up claims of new reagents for clinical
      diagnosis).
    5.8 Research document: Allan, R.W., et al. Am J Clin Path 129.5
      (2008): 706-713 (backs up claims of new reagents for clinical diagnosis)
    5.9 Research document: A van de Geijn, G-J, et al. Cytometry Part
      A79.9 (2011): 694-706 (backs up claims of new reagents for clinical
      diagnosis)
    5.10 Research document: Akagi, J et al. Cytometry A (2013) 83(2):
      227-34 (backs up claims of adoption for clinical assays).