New DNA forensics tools improve sustainable fisheries management and reduce wildlife crime
Submitting Institutions
Bangor University,
Aberystwyth UniversityUnit of Assessment
Earth Systems and Environmental SciencesSummary Impact Type
EnvironmentalResearch Subject Area(s)
Mathematical Sciences: Statistics
Environmental Sciences: Environmental Science and Management
Biological Sciences: Ecology
Summary of the impact
Application of Bangor's DNA forensic research has had major impacts on
the management and control of illegal wildlife trade. After initial work
providing evidence for criminal prosecutions with wider deterrent effects
on wildlife crime, Bangor-led research went on to apply these techniques
to trace fish (products) to their source populations to ban illegal,
unreported and unregulated fishing practices. Since 2009, this work has
improved stock management by the UK government and European Commission,
directly affected the Common Fisheries Policy reform and has been
implemented by the Marine Stewardship Council as a verification tool for
correct labelling of products.
Underpinning research
Bangor research to develop the use of genetic markers to determine the
source populations of animals and animal products by Prof. R. Thorpe (1996
- present) and Prof. G. Carvalho (2005 - present) et al. was born from the
need for a legal framework and validation of traceability tools, in which
DNA could be recovered from animal parts and products. Wildlife crime is
now the world's third largest illegal trade and DNA forensic techniques
are increasingly used in its prosecution. Crucial early research
demonstrating the potential of this field for conservation programs and
law enforcement was conducted at Bangor, in collaboration with Dr R. Ogden
and Dr R. McEwing, co-founders of a Bangor University spin-out company in
2003 called Wildlife DNA Services and both Honorary Research Associates at
Bangor since 2007. Specifically, novel genetic markers suitable for
forensic analyses were developed (3.1) and for species
identification in Asian black bear, badger, rhinoceros and birds of prey
(e.g. 3.2; 3.3). In a substantial further development, Bangor University
led an important (2008-2011) EU FP7 project "Traceability of fish
populations and fish products" (FishPopTrace — FPT) coordinated by
Carvalho, with significant collaboration from TRACE Wildlife Forensics
Network, an NGO established by Ogden and McEwing.
Led and coordinated by Carvalho, the €4M international FPT consortium
comprised 15 different institutes in Europe. Contributing project
researchers at Bangor were Dr M. Taylor (Lecturer 2005-2011, Senior
Lecturer 2011-2012) and Research Fellow Dr S. Helyar (2008-2011). Aimed
specifically at bridging the gap between academic science, policy makers and
end-users, it focused primarily on identifying, mapping and
monitoring fish stocks for policy makers and fisheries managers, in
relation to traceability and Illegal, Unreported and Unregulated Fishing
(IUU). The project's research generated applications and tools to enable
control and enforcement of fisheries management strategies by developing a
traceability framework based on molecular genetics, otolith chemistry and
morphometrics: traceability tools up to forensics standards for the
whole stock-to-fork chain. The first research step was to develop
genetic markers for four marine fish species (cod, herring, sole and hake;
all economically important EU priority species for enforcement and/or
conservation that are relatively widespread and known to exhibit
population structure) to enable detection of their populations of origin
and assess their diversity (3.4). Significant research outputs
validated the new traceability tools for specific stocks of these
four species (e.g. 3.5; 3.6), after which they could be directly applied
for IUU regulation purposes.
FPT was the first major project to produce tests that identify the
geographic origin of marine fish for fisheries enforcement with
sufficient certainty and level of validation to meet forensic standards
in court.
References to the research
Bangor authors are in bold. Citation counts obtained through
Google Scholar (October 2013).
Selected publications:
(3.1) Dawnay, N., Ogden, R., McEwing, R., Carvalho, G.R. &
Thorpe, RS. 2007. Validation of the barcoding gene COI for use in
forensic genetic species identification. Forensic Science
International 173: 1-6. DOI:
10.1016/j.forsciint.2006.09.013. In peer-reviewed journal, 100
citations
(3.2) Dawnay, N., Ogden, R., Wetton, J.H., Thorpe, R.S.
& McEwing, R. 2009. Genetic data from 28 STR loci for forensic
individual identification and parentage analyses in 6 bird of prey
species. Forensic Science International — Genetics 3:
e63-e69. DOI: 10.1016/j.fsigen.2008.07.001. In peer-reviewed
journal, 15 citations
(3.3) Peppin, L., McEwing, R., Ogden, R., Hermes, R., Harper, C.,
Guthrie A. & Carvalho, G.R. 2010. Molecular sexing of African
rhinoceros. Conservation Genetics 11: 1181-1184. DOI:
10.1007/s10592-009-9912-2. In peer-reviewed journal, 9 citations
(3.4) Nielsen, E.E., Cariani, A., Mac Aoidh, E., Maes, G.E.,
Milano, I., Ogden, R., Taylor, M., [...], Helyar, S.,
[...], FishPopTrace consortium & Carvalho, G.R. 2012.
Gene-associated markers provide tools for tackling IUU fishing and false
eco-certification. Nature Communications 3: 851. DOI:10.1038/ncomms1845.
In peer-reviewed journal, 10 citations (In REF2014 ID 0601).
(3.5) Limborg, M.T., Helyar, S.J., DeBruyn, M., Taylor, M.I.,
Nielsen, E.E., Ogden, R., Carvalho, G.R., FPT Consortium &
Bekkevold, D. 2012. Environmental selection on transcriptome-derived SNPs
in a high gene flow marine fish, the Atlantic herring (Clupea harengus).
Molecular Ecology 21: 3686-3703. DOI:
10.1111/j.1365-294X.2012.05639.x. In peer-reviewed journal, 13
citations (In REF2014 ID 07121).
(3.6) Helyar, S.J., Hemmer- Hansen, J., Bekkevold, D., Taylor,
M.I., Ogden, R., Limborg, M.T., Cariani, A., Maes, G.E., Diopere,
E., Carvalho, G.R. & Nielsen, E.E. 2011. Application of SNPs
for population genetics of non-model organisms: new opportunities and
challenges. Molecular Ecology Resources 11 (Suppl. 1), 1-14. DOI:
10.1111/j.1755-0998.2010.02943.x In peer-reviewed journal, 64
citations
Details of the impact
Impacts on wildlife crime law enforcement
The successful and novel application of genetic markers in a forensic
context led to a Bangor University spin-out company in 2003 called
Wildlife DNA Services. Its cofounders (Ogden and McEwing) went on to
establish the NGO TRACE Wildlife Forensics Network in 2007. Through
expansion of the TRACE Network, and in association with Bangor University,
its Programme Director, Ogden, has applied the outcomes of the Bangor
research (3.1-3.3) in major international wildlife forensics initiatives
that have been instrumental in expanding this pioneering field and in improving
the effectiveness of the enforcement of wildlife crime law. For
example, DNA-based sexing markers developed at Bangor (3.3) are being used
for identification of poached rhino carcasses in South Africa and are
incorporated in the Rhino DNA Index System (RhODIS): a database where,
since 2011, DNA profiles for all South African rhinos are being
accumulated. In its first year, over 5000 rhinos had been profiled and
1900 test kits including the Bangor markers were distributed as part of
the programme to halt poaching.2 These markers are also
included in the Scottish database launched in April 2013, that aims to
include every rhino (artefact) at Britain's zoos and museums to counter
the growing criminal threat of these horns being stolen for the black
market through increased risk of detection and successful prosecution2.
Additionally, global organisations such as the Royal Society for the
Prevention of Cruelty to Animals and the Partnership for Action against
Wildlife crime (PAW) use the research in prosecutions against wildlife
crimes such as poaching and illegal trade1,10. Bangor research
on birds of prey in particular (3.1) has been fundamental for the Animal
Health and Veterinary Laboratories Agency (AHVLA), in prosecutions
linked to the illegal capture and breeding of endangered birds and
investigations on the legitimacy of ownership of birds of prey in the UK.
Between 2009 and 2012, the work has led directly to two convictions (2009,
2010)10, and 220 samples have been analysed in so-called
compliance cases that did not proceed to court. Of these, 61 were from two
interlinked cases but a total of 39 keepers had birds tested, with a
well-recognised deterrent effect on illegal trade. The Bangor method
was chosen because of the quality of the markers, ease of use and
transparency and the DNA analyses were crucial in determining the
legitimacy of ownership of the birds. The method (3.1) has further been
used to develop tests for golden eagle, peregrine falcon, merlin, goshawk,
barn owl, common buzzard and palm cockatoo: advances which further empower
restriction of the illegal bird trade1.
Impacts on IUU regulation and sustainable fisheries management
The traceability tools created by the FishPopTrace (FPT) research have directly
impacted international stock management of fisheries. The Marine
Stewardship Council (MSC) uses the regional identifiers for Atlantic
cod (Gadus morhua) developed by FPT to provide assurance
that MSC-certified products are correctly labelled, and to identify
any areas of concern in the supply chain9. In 2012, 86 products
were tested using the FPT identifiers, verifying correct labelling of 99%
of MSC-labelled cod. Furthermore, the DNA testing program also helps to
deter MSC-certified companies from mislabelling products, which lowers
the likelihood of fraud in the supply chain. The MSC will continue
to carry out an annual DNA testing program using the FPT markers and is
collaborating with TRACE (since 2011) to expand the range of tests.9
Further evidence for the importance of the Bangor work for MSC efforts on
sustainable fishing, comes from their recent (2013) appointment of
Carvalho as an independent advisor on DNA testing in relation to fisheries
certification.
Key mechanisms by which FPT has had constructive, political impact on
individual member states decision-making to apply novel technologies to
fisheries regulations are through the provision of data,
information, and dissemination of infrastructure directly resulting from
the FPT proceedings. For example, in April 2012, the UK Government
launched a novel Defra-funded programme to implement the use of FPT
research outputs to improve fish traceability in UK stocks of four
economic priority fish species (Geographic traceability tools for
commercial fish and fish products - FA0118). The programme transfers the
FPT novel forensic DNA marker systems directly to stocks relevant to
government, industry stakeholders and non-governmental organisations in
the UK, enabling self-regulation, monitoring and enforcement of the
fishing industry at a scale not previously possible.
Impacts on EU Council regulations through the FishPopTrace project
In line with its commitment to engage with policy, the FishPopTrace (FPT)
consortium translated its research and technological advances into policy
recommendations and accessible information to managers and stakeholders.
The consortium created a concise policy document which analyses the
current policy framework for traceability of fish and fish products to
their geographic origin, tackling fish piracy and consumer fraud
(available on the FPT website). Specifically targeting policies and
legislation of the Common Fisheries Policy (CFP) on the key CFP aim of
promoting sustainability through conservation of genetic resources, the
consortium further submitted two contributions to the public consultations
launched by the European Commission (EC) for the CFP Control Reform and
the CFP Reform. These contributions have had a demonstrable direct
impact on the reform of the policy: the EU's decision to endorse the
use of advanced genetic and morphometric tools for fisheries management.
The project is specifically highlighted in the Impact Assessment report
that followed the consultation and underpinned the major proposal for
reform of the CFP control regime3-5. The project's methodology
and findings are also cited throughout in the 2011 reference report of the
Joint Research Centre of the European Commission (JRC) on deterring
illegal activities in the fisheries sector6.
Impacts on policy debate and pathways to impact
Additional impact of Bangor research on EU fisheries policy comes from influencing
policy debate through FPT's highly valued participation in
international meetings and workshops on traceability and control in the
fisheries sector, organised by JRC, Food and Agriculture Organization
(FAO) and other global authorities on fisheries management. Here, the
potential of advanced technologies and appropriate strategies for transfer
into more efficient fisheries control schemes was discussed directly with
relevant authorities on fisheries management at a political and industry
level7. Because of the perceived importance of the project's
findings, EU and FAO policy makers subsequently attended FPT meetings,
adding further reach to the project findings7. A
recommendation from the 2009 FishPopTrace consultation document [p.
6,13] that was taken up by the EC is exemplified by the JRC decision in
2009 to establish an Expert Group on new ways to comply with Data
Collection Regulation and integration of sustainability programmes
(kick-off meeting March 20128). As a direct impact of the
expertise developed through FPT, the group has engaged two population
geneticists, including Carvalho, to work on developing new integrative
tools for data collection8.
Sources to corroborate the impact
- A formal statement from the Wildlife Licencing and Registration
Service Compliance specialist at the AHVLA confirms claims on the use of
the bird of prey research by the AHVLA.
- A presentation by the University of Pretoria Scientists on the RhODIS
project, demonstrating the relevance of Peppin's markers and the scale
of the project can be found at:
http://www.rhinoresourcecenter.com/pdf_files/132/1321657369.pdf.
An email conversation with the lead scientist on the Scottish rhino
project is available on request and can confirm the inclusion of the
Bangor sexing markers. A press release on the database is available at:
http://www.scotland.gov.uk/News/Releases/2013/04/rhinodna09042013
- European Commission, 2008. Proposal for a council regulation
establishing a Community control system for ensuring compliance with the
rules of the Common Fisheries Policy. COM(2008) 721 final. Available at:
http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=COM:2008:0721:FIN:en:PDF.
FishPopTrace is explicitly mentioned on p.4 in relation to
traceability seminars organised "integral to the Common Fisheries
Policy reform".
- European Commission, 2008. Commission Staff Working Document
accompanying the proposal for a council regulation. Establishing a
Community control system for ensuring compliance with the rules of the
Common Fisheries Policy. IMPACT ASSESSMENT. Available at: http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=SEC:2008:2760:FIN:EN:PDF
FishPopTrace is explicitly mentioned on p.57.
- FPT had an impact on the CFP Control Regulation (Regulation (EC) No
1224/2009; (paragraph 16 and Article 13). Available at:
http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2009:343:0001:0050:EN:PDF
FishPopTrace participated actively through advice and communication
with the European Commission during the preparation phase of this
regulation.
- Martinsohn, J.T. 2011. DETERRING ILLEGAL ACTIVITIES IN THE FISHERIES
SECTOR. Genetics, Genomics, Chemistry and Forensics to Fight IUU Fishing
and in Support of Fish Product Traceability. European Commission Joint
Research Centre, Ispra, Italy. Available at:
http://publications.jrc.ec.europa.eu/repository/bitstream/111111111/16295/1/jrc_rr_deterring%2
0illegal%20fisheries_for_web-2_180511.pdf
- A list of workshops and meetings of FPT delegates with leading
fisheries authorities, demonstrating the tight link between FPT and
policy and management developments, can be provided on request.
- a4a Kick-off meeting report 28th February to 2nd March, 2012 JRC,
Ispra, Italy. Available on request.
- Marine Stewardship Council. 2012 DNA Testing of MSC-Labelled Products.
Methodology and Results. Available at: http://www.msc.org/about-us/credibility/dna-testing-methodology-and-
results-2012. Related press releases mentioning FishPopTrace and
its results are available at: http://www.msc.org/newsroom/news/dna-testing-delivers-positive-results-for-msc-traceability-
standard-and-validation-programme (2010) and http://www.msc.org/newsroom/news/latest-
dna-results-confirm-integrity-of-msc-chain-of-custody/?searchterm=dna
(2013).
- A list of cases in which the Dawnay et al. 2009 outputs were
instrumental in obtaining conclusive evidence in court can be found at:
http://www.tracenetwork.org/wp-
content/uploads/2012/08/5-WILDLIFE-RELATED-INVESTIGATIONS-INVOLVING-DNA-
EVIDENCE-NOV-11.xls (Sep-09 and Nov-10 conviction dates).