The DNA damage response in human biology and disease
Submitting Institution
University of CambridgeUnit of Assessment
Biological SciencesSummary Impact Type
TechnologicalResearch Subject Area(s)
Biological Sciences: Biochemistry and Cell Biology, Genetics
Summary of the impact
Research by Professor Steve Jackson led to the discovery of synthetic
lethality as a means of selectively targeting cancer cells, and to Jackson
founding KuDOS Pharmaceuticals to translate this research into therapies.
This novel approach has changed the way pharmaceutical companies develop
cancer therapeutics and has led to several drugs reaching pre-clinical and
clinical development. The most advanced of these (olaparib, a PARP
inhibitor originally developed at KuDOS and acquired by Astra Zeneca) is
now entering Phase 3 trials and registration in Europe. In 2011, Jackson
founded MISSION Therapeutics Ltd, to extend the synthetic
lethality concept into targeting deubiquitylating enzymes to selectively
kill tumour cells.
Underpinning research
Professor Steve Jackson joined the University of Cambridge (Wellcome
Trust/Cancer Research UK Gurdon Institute) in 1991, becoming the Quick
Professor of Biology. His major research focus has been on cellular
responses to DNA damage. He has identified many key DNA damage response
(DDR) proteins, and demonstrated how the DDR impinges on telomere
maintenance and chromatin structure, and helped to reveal that DDR defects
lead to genome instability, immune deficiency, neuro-degeneration, and
cancer.
From 1993, Jackson and colleagues (PDRA; Graeme Smith 1994-1999, research
technicians; Kathy Hartley 1991-1994, Rebecca Izzard 1996-1999) continued
a body of research on DNA- dependent protein kinase (DNA-PK), having
recently shown that DNA ends and Ku antigen binding were required for its
mechanism of action. Importantly, they demonstrated, by cell culture- and
biochemistry-based methods, that DNA-PK (involved in double strand break
repair and V(D)J recombination) comprised a DNA-targeting component (Ku),
and a catalytic subunit (DNA-PKcs) that was related to the
phosphatidylinositol (PI) 3-kinases. Strikingly, Jackson found that DNA-
PKcs is similar to kinases involved in cell cycle control, DNA damage
responses and DNA repair; mutations of which (e.g. the
ataxia-telangiectasia gene ATM) lead to genomic instability and
predisposition to cancer [Hartley 1995, Cell]. Recognising the clinical
significance of this, Jackson sought to develop medium/high throughput
drug screening methods for compounds targeting DDR pathways. In 1997
Jackson filed 4 patents on therapeutic and diagnostic methods relating to
his work (patent families; WO9830903, WO9830902, WO9904266, WO9931234),
covering Europe, Japan, Australia, Canada and in 3 cases the US. Based on
these and his overall research, he founded KuDOS Pharmaceuticals Ltd, in
1997 (with support from the University and from Cancer Research UK), to
translate research from the Jackson lab into novel cancer therapies.
In 1999 Jackson's group, studied the effects of the known PI3- /
PI4-kinase inhibitors; wortmannin, LY294002 and quercetin on DNA-PK
activity in human lymphoblastoid and human glioma cells. Whilst LY294002
and quercetin inhibited DNA-PK in a competitive manner, inhibition by
wortmannin was non-competitive with binding to the DNA-PKcs being
independent of Ku- or DNA, but sensitive to ATP. Although the study
demonstrated that the profile of these inhibitors was broader than
previously expected, it raised the possibility that derivatives of these
compounds could serve as the basis of more selective inhibitors for
DNA-PKcs. Given that wortmannin and LY294002 were known to radiosensitize
mammalian cells, in culture, Jackson recognised that such agents could
have therapeutic potential by increasing the efficacy of cancer
chemotherapy and radiotherapy [Izzard 1999 Cancer Research]. Further
research led by Jackson, in collaboration with Byron Hann (University of
Dundee), led to the identification of a novel DNA-activated protein
kinase; ataxia-telangiectasia related protein "ATR", which phosphorylates
the tumour suppressor protein p53 and acts in a manner distinct from
DNA-PK [Lakin 1999 Oncogene]. The three PI 3 kinase-related protein
kinases (PIKKs); ATM, ATR and DNA-PKcs were then studied further in
recombinant cells, and by a combination of immunohistochemistry and
immunoprecipitation, shown to share the same mode of recruitment to sites
of DNA damage [Falck 2005 Nature].
Since mutation of ATM (as in the autosomal recessive disorder
ataxia-telangiectasia) causes hypersensitivity to ionizing radiation, and
damage after DNA double strand breaks, Jackson sought to determine whether
inhibition of this kinase would also lead to radio- and
chemosensitization. In 2004, together with researchers now based at KuDOS
Pharmaceuticals Ltd, he led a study to screen a library of small molecules
designed to inhibit PIKKs, and identified a novel inhibitor, selective
against ATM; Ku55933 [Hickson 2004, Cancer Res]. Exposure of cells to this
compound indeed resulted in sensitization to the cytotoxic effects of
ionizing radiation and to agents known to induce DNA double strand breaks.
The method of targeting defects in the DNA repair pathway as a
therapeutic strategy for cancer was developed further in a pioneering
study published in Nature in 2005. Here, Jackson, together with
researchers at KuDOS Pharmaceuticals and Cancer Research UK, demonstrated
that inhibition of poly(ADP-ribose) polymerase (PARP), a key enzyme in the
repair of DNA single strand breaks, was lethal to cells already
compromised in DDR pathways due to a mutation of BRCA1/2; (each key to
double strand break repair, mutations of which predispose to several
cancers). This pioneering study introduced the concept of "synthetic
lethality", wherein two genes that are not lethal when mutated
individually (or the gene products inhibited individually) are lethal when
the two genes are mutated within the same cell, or translating to a
clinical setting; a cell with one mutated gene (such as BRCA in cancer)
has the second gene product (a kinase of the DDR pathway) artificially
inhibited (here with the PARP inhibitor KU0058684 [Farmer 2005, Nature].
Jackson's recent research has shown how protein ubiquitylation and
sumoylation control cancer- relevant DNA repair processes [e.g. Kolas et
al, Science 2007], leading him to establish MISSION Therapeutics,
a company that is developing small-molecule inhibitors of ubiquitylation
and deubiquitylation to target new synthetic-lethality opportunities in
cancer.
References to the research
1. Hartley K, Gell D, Smith GCM, Zhang H, Divecha N, Connelly MA, Admon
A, Lees-Miller SP, Anderson CW and Jackson SP. (1995) DNA-dependent
protein kinase catalytic subunit: a relative of phosphatidylinositol
3-kinase and the ataxia telangiectasia gene product. Cell 82,
849-856.
2. Izzard, R. A., Jackson, S. P. and Smith, G. C. M. (1999). Competitive
and noncompetitive inhibition of the DNA-dependent protein kinase. Cancer
Research 59, 2581-2586.
3. Lakin ND, Hann BC, Jackson SP. (1999). The ataxia-telangiectasia
related protein ATR mediates DNA-dependent phosphorylation of p53. Oncogene
18, 3989-3995.
4. Falck J, Coates J, Jackson SP (2005) Conserved modes of recruitment of
ATM, ATR and DNA- PKcs to sites of DNA damage. Nature 434,
605-611.
5. Hickson I, Zhao Y, Richardson CJ, Green SJ, Martin NM, Orr AI, Reaper
PM, Jackson SP, Curtin NJ, Smith GC. (2004) Identification and
Characterization of a Novel and Specific Inhibitor of the
Ataxia-Telangiectasia Mutated Kinase ATM. Cancer Res. 64, 9152-9.
6. Farmer H, McCabe N, Lord CJ, Tutt ANJ, Johnson DA, Richardson TB,
Santorosa M, Dillon K J, Hickson I, Knights C, Martin NMB, Jackson SP,
Smith GCM, Ashworth A (2005) Targeting the DNA repair defect in BRCA
mutant cells as a therapeutic strategy. Nature 434, 917-921.
7. Kolas, N.K., Chapman, J.R., Nakada, S., Ylanko, J., Chahwan, R.,
Sweeney, F.D., Panier, S., Mendez, M., Wildenhain, J., Thomson, T.M.,
Pelletier, L., Jackson, S.P. and Durocher, D. (2007). Orchestration of the
DNA-damage response by the RNF8 ubiquitin ligase. Science 318,
1637- 1640.
Key research grants 1993-2010 (Jackson as PI unless otherwise
indicated):
Cancer Research Campaign; 1991-1996; £532,231 and 1996-2001;
£884,160.
Cancer Research UK. 2000-2005; £1,650,000 and 2005-2010;
£2,863,947.
EU Framework Programme 6. 2005-2009, 15 participants; grant to
Jackson lab: £707,857.
EU Framework Programme 7. 2008-2010, 11 participants; grant to
Jackson lab: £139,000.
MRC Link Applied Genomics Grant. 2003-2005; grant to Jackson lab:
£179,889.
Recipient of the Biochemical Society 2008 GlaxoSmithKline Award and of
BBSRC Innovator of the year 2009: for work that led to establishment of
KuDOS and its eventual acquisition by AZ
Details of the impact
Research by Jackson and colleagues led to the development of novel
therapies and approaches to treatment for cancer and to the spin-out
company KuDOS Pharmaceuticals, acquired by AstraZeneca in 2010. This has
subsequently had a large impact on health and commerce in several ways;
Impact on Health; novel therapeutics
1) PARP inhibitors; Olaparib, originally developed by KuDOS
Pharmaceuticals Ltd. (Ku-0059436), since acquired by AstraZeneca (AZD2281)
has been used in over 30 Phase 1/2 clinical trials [ref 1] (either
on-going or completed since 2008, over 20 of which started after 2008).
These have targeted a range of cancers including; breast, ovarian,
colorectal, lung, pancreatic and gastric cancer. Most recently (June 2013)
olaparib was approved for a Phase 3 clinical trial (NCT01844986) for the
management of BRCA-mutated ovarian cancer [ref 2].
2) m-TOR inhibitors; Jackson's work screening small libraries of
compounds targeting various related kinases; m-TOR, ATM and DNA-PK,
directly led to KuDOS Pharmaceuticals and AstraZeneca developing two m-TOR
inhibitors as cancer therapeutics; AZD8055 (now in Phase 1 clinical
trials; NCT00731263, NCT00999882, NCT00973076 sponsored by AZ and
NCT01316809 sponsored by NCI) [ref 3] and AZD2014 (which has reached Phase
1 (NCT01026402, NCT01597388) and Phase 2 (NCT01793636) trials) [ref 4].
3) AstraZeneca also have an ATR inhibitor; AZ20 in pre-clinical
development. This has anti-tumour activity in vivo [ref 5] and is expected
to enter Phase 1 clinical trials in the near future.
Impact on Commerce; new business/ spin-out company established
KuDOS Pharmaceuticals was founded by Jackson in 1997 (seed-funded),
received its first venture capital funding in 1999 and was acquired by
AstraZeneca for $210 million in 2006. It remained semi-autonomous until
2010 when its programmes were transferred entirely into AstraZeneca [Ref
6]. At the time of acquisition, KuDOS had expanded to 75 employees. MISSION
Therapeutics Ltd (a private drug discovery company in Cambridge) was
founded by Jackson in 2011 in order to develop small molecule drugs that
target deubiquitylating enzymes (DUBs) involved in the DNA damage
response, with the aim of inducing synthetic lethality, to selectively
kill specific tumour cells. In 2011 the company raised £6 million in
Series A funding from a strong venture capital syndicate led by Sofinnova
Partners, and comprising Imperial Innovations, SR One and Roche Venture
Fund. MISSION was recently (February 2013) granted a Biomedical
Catalyst Feasibility Award by the Technology Strategy Board (£144,000) to
support the identification of DUBs required for the survival of
drug-resistant ovarian cancers. MISSION currently has 19 employees
and funds over 30 FTE posts at various clinical research organisations in
the UK and beyond.
Impact on Commerce; new products commercialised
A number of compounds developed by KuDOS as a result of Jackson's work
have been sold by agreement (initial agreement with either KuDOS or
AstraZeneca) for research purposes and continue to be sold and /
distributed by Tocris Cookson (i.e.; the m-Tor inhibitor Ku-0063794, the
ATM inhibitors Ku-55933 and Ku-60019 and the selective DNA-PK inhibitors
Nu-7441 and NU7026 developed at Newcastle University in collaboration with
KuDOS.) [Ref 7]. Ku-0063794 is also widely distributed by several
providers of compounds for medical research including; Sigma- Aldrich,
Caymen Chemicals, Stemgent, Stratech, Selleckchem.
Impact on Commerce; a new approach has been adopted by the
pharmaceutical industry
Jackson's pioneering approach of "synthetic lethality", as a means of
specifically targeting tumour cells, was recognised by researchers in the
field as leading cancer therapy in a "new direction". Alongside the
publication of the Phase 1 study (NCT00516373) of olaparib in patients
with BRCA mutations (Fong et al. 2009, NEJM; 3 KuDOS-based co-authors), an
accompanying article (Inglehart and Silver 2009, NEJM) highlighted the
importance of this early phase trial, based on its novel approach [Ref 8].
The approach of synthetic lethality and targeting DDR pathways in general,
has been widely adopted by pharmaceutical companies seeking to develop
their own PARP, DNA-PK, ATM and ATR inhibitors (for recent review with
examples of compounds in pre- clinical and clinical development see Ref
9), which now include a number of dual-specificity inhibitors that target
several aspects of the DNA repair pathway. For example, Celgene
Corporation have developed a dual DNA-PK and TOR inhibitor; CC-115 that is
about to enter Phase 1 clinical trials (NCT01353625) [Ref 10]. Astra
Zeneca have invested in excess of £50M in the area of DNA repair since the
acquisition of KuDOS [Ref 11].
Impact on public awareness
Steve Jackson has engaged with the charity Cancer Research UK to increase
public understanding of the process of DNA repair and its links with
cancer and the progress being made in his lab (for example see interview
in 2011; Ref 12).
Sources to corroborate the impact
- http://clinicaltrials.gov/ct2/results?term=AZD2281&Search=Search
- http://clinicaltrials.gov/ct2/show/NCT01844986
- http://clinicaltrials.gov/ct2/results?term=AZD8055&Search=Search
- http://clinicaltrials.gov/ct2/results?term=AZD2014&Search=Search
- http://pubs.acs.org/doi/pdf/10.1021/jm301859s
- http://www.bloomberg.com/apps/news?pid=newsarchive&sid=aIv205k6elRw&refer=uk
- http://www.tocris.com/
- http://www.nejm.org/doi/full/10.1056/NEJMe0903044
- http://www.smw.ch/content/smw-2013-13837/
- http://clinicaltrials.gov/ct2/results?term=NCT01353625&Search=Search
- Letter from Executive Vice President, Innovative Medicines and Early
Development, AstraZeneca R& D, Macclesfield
- http://myprojects.cancerresearchuk.org/projects/cambridge-research