Microbial Production and Metabolism of Polysaccharides
Submitting Institution
University of HuddersfieldUnit of Assessment
Biological SciencesSummary Impact Type
TechnologicalResearch Subject Area(s)
Chemical Sciences: Organic Chemistry
Biological Sciences: Genetics, Microbiology
Summary of the impact
University of Huddersfield research into the microbial production and
metabolism of
polysaccharides has had a significant impact in two distinct areas. In the
food and health care
industry it has driven developments in the use of bacterial starter
cultures, leading to the adoption
of new techniques to produce fermented products with proven functionality.
In the policy arena, in
modelling gas production by microorganisms, it has made a major
contribution to the safety case
for the disposal of nuclear waste, highlighting the economic and
environmental benefits of
underground storage. In each instance the reach of the research's impact
has been international
with the biggest beneficiaries residing in Europe and North America.
Underpinning research
An understanding of the potential health benefits associated with
probiotic bacteria has led to
commercial interest in related research. Work by the University of
Huddersfield's Department of
Biological Sciences has focused on relating the biological activity of the
polysaccharides secreted
by probiotic organisms (exopolysaccharides — EPSs) to their structure and,
working with
international collaborators, to correlate variation in EPS structures with
changes in the sequence of
the EPS synthesis genes. This work is only possible because of our
development of methods for
production and isolation of pure EPSs for use in characterization studies
and in measurement of
biological activity [1, 2, 3].
Huddersfield's early studies in this area were funded by two large
European Framework grants,
spanning 1998 to 2003 [G1, G2]. Both programmes featured academic
partners from Europe and
Scandinavia and industrial partners from France (Rhodia Foods) and Poland
(Biolacta Texel).
Rhodia and Biolacta's focus was on the development of EPS cultures with
specific functionality-texture
attributes. Initially led by Professor Valerie Marshall (Head of
Department, 1998-2005,
retired) and Professor Andrew Laws (Director of Research, School of
Applied Sciences, 1998-),
the Huddersfield team was responsible for coordinating these European
projects, for selecting
cultures with the ability to produce EPSs [1]; establishing
methods for the controlled production of
functional EPSs from lactic acid bacteria (LAB) [2].
In 2003, Dr Paul Humphreys (Senior Lecturer 2002-2010, Reader in
Microbiology 2010-) joined
the research team and work was extended to include probiotic strains of
bifidobacteria. New
characterization techniques were developed including real-time measurement
of polysaccharide
chain length. At the same time the team also started working closely with
Dr Ruas-Madiedo and
colleagues at the Instituto de Productos Lacteos de Austurias (IPLA), part
of the Spanish Research
Institute, CSIC. The probiotic team at IPLA-CSIC is recognized as one of
the leading government
funded research groups studying the biological activity and genetics of
bifidobacteria. IPLA-CSIC
works closely with the Spanish dairy sector. With IPLA, the Huddersfield
microbiology team has
jointly published work describing both the gene sequence and the structure
of an EPS from a
bifidobacterium [3]. This work was funded through a grant from
CSIC [G3].
In related research, the team has also used its expertise to study
microbial polysaccharide
metabolism — particularly gas and small molecule generation during
microbial-catalysed cellulose
decomposition. This work, initiated by Humphreys in 2002 and carried out
by both Humphreys and
Laws since 2009, has helped provide a comprehensive understanding of the
fate of cellulosic
materials in waste facilities, which is widely regarded as a key factor in
the safety case for
proposed underground nuclear waste repositories. [4, 5, 6]. This
work was funded by a large
EPSRC grant [G4] and small grants from the UK-Nuclear
Decommissioning Authority (NDA) and
Ontario Nuclear Waste Management Organisation (NWMO) [G5, G6].
The research investigated the microbial production of highly mobile gases
such as methane,
carbon dioxide and hydrogen. Being radioactive and highly flammable, these
gases pose a threat
to the safe storage of intermediate and low-level radioactive waste if
directly released into the
environment [4] The team also studied the production and
subsequent fate of small organic
molecules, generated during cellulose hydrolysis, that can complex with
radionuclides and
potentially escape into the geosphere through water courses. The principal
outcome was a
computational model, developed by Humphreys [6a, b], for
estimating gas production during the
microbial decomposition of cellulosic waste.
References to the research
[1] Marshall, VM, Laws, AP, Gu, Y, Levander, F, Radstrom,
P, De Vuyst, L, Degeest, B,
Vaningelgem, F, Dunn, H, and Elvin, M: `Exopolysaccharide-producing
strains of thermophilic lactic
acid bacteria cluster into groups according to their EPS structure'
(2001), Letters in Applied
Microbiology, 32(6), 433-437. DOI:
10.1046/j.1472-765X.2001.00937.x
[2] Harding, LP, Marshall, VM, Hernandez, Y, Gu, Y,
Maqsood, M, and Laws, AP, `Structuralcharacterisation
of a highly branched exopolysaccharide produced by Lactobacillus
delbrueckii subsp bulgaricus NCFB2074'
(2005), Carbohydrate Research, 340(6) 1107-1111. DOI:
10.1016/j.carres.2005.01.038
[3] Leivers S, Hidalgo-Cantabrana C, Robinson G, Margolles A,
Ruas-Madiedo P, Laws AP:
`Structure of the high molecular weight exopolysaccharide produced by Bifidobacterium
animalis
subsp. lactis IPLA-R1 and sequence analysis of its putative EPS
cluster' (2011). Carbohydrate
Research, 346(17), 2710-7. DOI: 10.1016/j.carres.2011.09.010
[4] Metcalfe, R, Watson SP, Rees, JH, Humphreys, P, and
King, F: `Gas generation and
migration from a deep geological repository for higher activity
radioactive waste', Nuclear Waste
Assessment Team Report (2008) NWAT/NDA/RWMD/2008/002, http://a0768b4a8a31e106d8b0-50dc802554eb38a24458b98ff72d550b.r19.cf3.rackcdn.com/geho1108bozn-e-e.pdf
[6a] Avis, J., West, A., Walsh, R., Calder, R., Suckling, P., Humphreys,
P. and King, F.
`Detailed Modelling for the
Postclosure Safety Assessment of OPG's DGR.', In: `Waste
Management, Decommissioning and Environmental Restoration for Canada's
Nuclear Activities',
Sep 11 — Sep 14 2011', (2011) Ontario, Canada, p. 27
Additional indicators of quality:
The work on exopolysaccharide production was supported by either the
European Community or
directly by European Research institutes with Huddersfield coordinating
the work of Internationally
recognised research teams [Grants to Marshall and Laws G1-G3]. The
work on microbial gas
production has been supported by government funding agencies in Canada and
Europe, again,
demonstrating the international excellence of our research outputs G4-G6.
Grants[G1-G6]:
[G1] Awarded to Marshall (PI); INCO Copernicus IC15-CT98-0905;
European Grant (1998-2002)
225,000 euros.
[G2] Awarded to Marshall (PI) & Laws (CoI); FAIR CT-98-4267;
European Grant (1999-2002)
1,088,355 euros.
[G3] Awarded to Laws (PI); Spanish Plan Nacional de I+ D through
project AGL2009-09445,
(2009-2011) 20,000 euros.
[G4] Awarded to Humphreys (PI); The Post-Disposal Behaviour of
C-14 and Irradiated Graphite;
EPSRC EP/I036354/1 (2011-2015) £728,414.
[G5] Awarded to Humphreys and Laws; UK funding for Nuclear work —
Nuclear Decommissioning
Authority contracts; sponsors include-SERCO, Quintessa and AMEC;
(2008-2013) £50,413.
[G6] Awarded to Humphreys (PI); International funding for Nuclear
work; sponsors include DGR-Canada,
NAGRA-Switzerland, VTT-Finland; (2008-2013) £34,020.
Details of the impact
Huddersfield's research into the microbial production and metabolism of
polysaccharides has had
a significant impact in two distinct areas. Firstly, research into EPS
production has impacted on
manufacturing industry, both the dairy industry and manufacturers of
personal care products,
where it has driven developments in the use of bacterial starter cultures.
Secondly, work on
microbial gas production has impacted the policy arena surrounding the
disposal of nuclear waste,
where it has informed the debate on safety and helped deliver economic and
environmental
benefits.
Throughout the impact period the methods established for screening LAB
cultures for EPS
production have been adopted by industry. Initially applied to fermented
milks, the techniques are
now used for various fermented products with functional properties. For
example the personal care
industry has recruited EPSs as agents for modifying the viscosity and
performance of personal
care products. The methods developed at Huddersfield for characterizing
EPSs have been
adopted by Croda (Europe) who have acknowledged that our work has provided
`valuable input to
development of our strategy for characterizing product candidates' [A].
The work has also guided government research organisations outside the
UK. For instance, the
Spanish Dairy Institute (Instituto de Productos Lacteos de Astruias —
IPLA) is currently using the
results of Huddersfield's research into EPSs from bifidobacteria to
identify specific mutant cultures
that are good EPS producers and have proven health benefits. IPLA
scientists have described
Huddersfield's contribution to the Institute's ongoing work in this field
as having `pivotal importance'
in strengthening the research direction of the Probiotic group [B].
A number of patents have also cited the research, including United States
patent number US
73232 B2, which was granted in January 2008 to Luc De Vuyst and Bart
Degeest, of Vrije
Universiteit Brussel, for a method for preparing yoghurt and other
fermented milk products using a
starter culture with an EPS-producing micro-organism [C].
A number of agencies with responsibility for developing the safety case
for proposed underground
storage facilities for nuclear waste have drawn on Huddersfield's
expertise in modelling the
microbial decomposition of cellulose and gas generation. This work was
funded through several
successful bids for research contracts from the UK's Nuclear
Decommissioning Authority (£65,000
during the impact period [G5, G6]) and Ontario Power Generation
(OPG), which is responsible for
Canada's nuclear waste disposal facilities. Acknowledging their
significance, researchers from
SERCO, the National Nuclear Laboratories and other UK universities have
contributed
experimental data for use in Humphreys' computational models. As a result,
Huddersfield's work
has helped shaped UK and Canadian government policy in this increasingly
important area. This is
evidenced by Huddersfield's contributions to a series of key position
papers and technical
documents, chief among them 2010's Near Field Evolution Status Report,
Radionuclide Behaviour
Status Report and Gas Status Report for the NDA [D-F]
and 2011's Environmental Impact
Statement Summary and Postclosure Safety Assessment for OPG [G-H].
The latter relate to OPG's proposed Deep Geologic Repository (DGR)
Project for Low and
Intermediate Level Waste at the Bruce nuclear facility in the Municipality
of Kincardine.
Huddersfield's work has been crucial to what OPG has described as "a
thorough, traceable, step-wise
assessment process" to identify the potential environmental
repercussions of all phases of the
project. Humphreys' modelling has helped to demonstrate the likely effects
of microbial
decomposition in the years following closure, leading to the conclusion
that the repository will take
"hundreds of thousands or even millions of years" to re-saturate. A
public hearing into the project,
which was the first of its kind in Canada, took place in September 2013.
Dr Humphreys contributed
as a `microbiology expert' and his comments are cited in the transcript of
the meeting [I]. If
approved, the DGR is expected to be operational by 2018.
In the UK the NDA has suggested the building of such facilities will
bring about not just major
environmental benefits but considerable economic impacts. It has been
estimated that the initial
work to investigate the potential geology at a selected candidate site
would require an average of
around 440 staff and take around 10 years to complete; construction would
require 840 staff; and
operation would require 560 staff. Huddersfield's work in this field is
therefore helping to lay the
foundations for what experts believe will be a major new industry.
Sources to corroborate the impact
[A] Croda Biotechnology, Croda Europe Ltd. Contact 1.
[B] Instituto de Productos Lacteos de Asturias, Consejo Superior
DE Investigaciones Cientificas,
Carretera de Infiesto, Spain. Contact 2.
[C] United States patent number US 7323199 B2, De Vuyst, L, and
Degeest, B: Method for the
preparation of yoghurt and other fermented milk products
http://www.google.co.uk/patents/US7323199
[D] NDA REPORT: NDA/RWMD/033 — Near Field Evolution Status Report
http://www.nda.gov.uk/documents/upload/Geological-Disposal-Near-field-evolution-status-report-December-2010.pdf
(see page 150)
[E] NDA REPORT: NDA/RWMD/034 — Radionuclide Behaviour Status
Report
http://www.nda.gov.uk/documents/upload/Geological-Disposal-Radionuclide-behaviour-status-report-December-2010.pdf
(see pages 115 and 117)
[F] NDA REPORT: NDA/RWMD/O37 — Gas Status Report
http://www.nda.gov.uk/documents/upload/Geological-Disposal-Gas-status-report-December-2010.pdf
(see pages 112 and 113)
[G] Ontario Power Generation Deep Geologic Repository Project for
Low and Intermediate Waste
report: Environmental Impact Statement Summary (2011)
http://www.opg.com/power/nuclear/waste/pdf/NWMO%20216%20-%20EIS%20Summary.pdf
(see
page 44 for use of Huddersfield model for gas generation)
[H] Ontario Power Generation Deep Geologic Repository Project for
Low and Intermediate Waste
report: Postclosure Safety Assessment (NWMO DGR-TR-2011-25, 2011)
http://www.nwmo.ca/uploads/DGR%20PDF/Licensing/Postclosure-Safety-Assessment.pdf
(see
page 76, inter alia, for use of Huddersfield model for gas generation)
[I] Canadian Nuclear Safety Commission Microbial Effects Review
(CNSC IR-EIS-21)
http://www.ceaa-acee.gc.ca/050/documents/p17520/94516E.pdf
(see page 23 Line 21)