Novel genetic marker-assisted breeding produced a new pearl hybrid grown for 700,000 ha of drought-prone areas in northern India which has improved food security of three million people.
Submitting Institutions
Aberystwyth University,
Bangor UniversityUnit of Assessment
Agriculture, Veterinary and Food ScienceSummary Impact Type
TechnologicalResearch Subject Area(s)
Biological Sciences: Genetics, Plant Biology
Agricultural and Veterinary Sciences: Crop and Pasture Production
Summary of the impact
Research using novel techniques of genetic marker-aided selection enabled
the development of new high yield, disease- and drought-resistant pearl
millet hybrids, of which HHB67-Improved was released throughout
India. HHB67-Improved is the first product of marker-assisted
breeding to reach cereal producers in India and has spread rapidly since
its release, preventing yield losses to downy mildew of up to 30% (valued
at £7.8M) per year, and providing £2.6M additional annual grain yield. By
2011, it was grown on over 700,000 ha and currently three million people
have improved food security as a direct result of this international
development focused work.
Underpinning research
Pearl millet is grown for grain and stover in some of the harshest
environments of Africa and South Asia. In India, where 40% (9M ha) of the
world's millet is grown, at least 70% consists of genetically uniform
hybrids, particularly vulnerable to downy mildew, the single most
destructive pearl millet disease. Epidemics can cause reductions in total
harvests of 30% or more. As the crop is rain-fed, scant and unreliable
rainfall can further drastically reduce yield. Grown by the poorest
farmers cultivating the least favourable land, pearl millet stands between
famine and food sufficiency for many families, and improving downy mildew
resistance and yield in a widely grown drought tolerant variety such as HHB67
has had a major impact on improving food security.
Collaborative research by the Centre for Arid Zone Studies (now Centre
for Advanced Research in International Agricultural Development, CARIAD)
at Bangor University, the Institute of Grassland and Environmental
Research (now Institute of Biological, Environmental and Rural Sciences,
IBERS) at Aberystwyth, the International Crops Research Institute for the
Semi-Arid Tropics (ICRISAT) and the John Innes Centre used a combination
of traditional techniques and the novel method of genetic marker-assisted
backcrossing selection to develop improved hybrids of pearl millet, as
part of the DFID-funded Plant Sciences Research Programme. This
collaborative research since 1993 by Professor Witcombe (1990-present), Dr
Yadav (researcher 1996-present), Dr Howarth (researcher 1985-present) and
Dr Breese (researcher 1996-2006) in BEAA produced a number of new genetic
resources, including the first ever molecular marker map in pearl millet
[3.1], and maps of the genetic basis of specific traits such as disease
resistance [3.2, 3.3], and yield. These were a prerequisite for the
subsequent marker-assisted breeding in millet [3.4].
This research enabled the subsequent transfer of downy mildew resistance
into the popular millet variety HHB67 [3.5] using marker-assisted
backcrossing [3.6], a new model for hybrid breeding combining traditional
techniques and the high-tech method of genetic marker-assisted selection
to introduce the mapped downy mildew traits into a new cross. HHB67
was widely grown (about 550,000 ha) by resource-poor farmers in Northern
India but was becoming very susceptible to downy mildew. The aim of our
research was to retain the advantageous traits of HHB67 (high
yield and drought escape through very early maturity) whilst improving
downy mildew resistance.
Genetic markers for downy mildew resistance identified by BEAA from the
ICMP451 parent were used to backcross a downy mildew resistance
quantitative trait locus (QTL) into the male-parent of HHB67.
Subsequent screening to confirm downy mildew resistance in the backcross
progeny was done by BEAA and ICRISAT by 2000. Using marker-assisted
backcrossing allowed quick identification of resistance traits in the
laboratory through analysis of the plant's DNA, a much faster and more
reliable process than field trials. Conventional backcross transfer of
downy mildew resistance to a parental donor plant of HHB67 took
nearly nine years (1991-1999), while novel marker-assisted backcross
transfer was completed in just over three years (1997-2000), once the
markers had been developed and marker-trait associations established.
Field screening of the best backcross products at ICRISAT and downy
mildew screening at BEAA was followed by field testing of the best of
these in Northern India in 2001-2004. From these trials, the best line not
only had improved downy mildew resistance but, through beneficial
non-target contributions from ICMP451, 5-10 % more grain and stover yield
than the original HHB67 [3.5]. HHB67-Improved constitutes
a technological milestone in unconventional plant improvements, marking
the era of DNA marker-assisted breeding.
References to the research
3.1. Liu, C.J., Witcombe, J.R., Pittaway, T.S., Nash, M., Hash,
C.T., Busso, C.S., Gale, M.D. 1994. An RFLP-based genetic map of pearl
millet (Pennisetum glaucum). Theoretical and Applied Genetics
89: 481-487. Doi 10.1007/BF00225384. 90 citations.
3.2. Jones, E.S., Liu, C.J., Gale, M.D., Hash, C.T., Witcombe
J.R. 1995. Mapping quantitative trait loci for downy mildew
resistance in pearl millet. Theoretical and Applied Genetics 91:
448-456. Doi 10.1007/BF00222972. 73 citations.
3.3. Breese, W.A., Hash, C.T., Devos, K.M., Howarth, C.J..
2002. Pearl millet genomics — an overview with respect to breeding for
resistance to downy mildew. Pages 243-246 in Sorghum and Millets
Pathology 2000 (Leslie, J.F., ed.) Ames, Iowa, USA: Iowa State
Press. 24 citations.
3.4. Witcombe, J.R., Joshi, K.D., Gyawali, S., Musa, A.M.,
Johansen, C., Virk, D.S., Sthapit, B.R. 2005. Participatory plant breeding
is better described as highly client-oriented plant breeding. I. Four
indicators of client-orientation in plant breeding. Experimental
Agriculture 41: 299-319. Doi:10.1017/S0014479705002656. 82
citations.
3.5. Hash, C.T., Sharma, A., Kolesnikova-Allen, M.A., Singh, S.D.,
Thakur, R.P., Bhasker Raj, A.G., Ratnaji Rao, M.N.V., Nijhawan, D.C.,
Beniwal, C.R., Sagar, P., Yadav, H.P., Yadav, Y.P., Srikant,
Bhatnagar, S.K., Khairwal, I.S., Howarth, C.J., Cavan, G.P., Gale,
M.D., Liu, C., Devos, K.M., Breese, W.A., Witcombe, J.R. 2006.
Teamwork delivers biotechnology products to Indian small-holder
crop-livestock producers: Pearl millet hybrid "HHB67- Improved" enters
seed delivery pipeline. SAT e-Journal 2: 3 pp. Available
at: http://www.icrisat.org/Journal/bioinformatics/v2i1/v2i1teamwork.pdf
3.6. Witcombe, J.R., Hash, C.T. 2000. Resistance gene deployment
strategies in cereal hybrids using marker-assisted selection: gene
pyramiding, three-way hybrids, and synthetic parent populations. Euphytica
112: 175-186. Doi 10.1023/A:1003836132603. 45 citations.
Details of the impact
HHB67-Improved was the first pearl millet variety produced by DNA
marker-assisted-selection to reach farmers in India. In 2005, it was
officially approved for cultivation in Haryana state, followed by
approval of its All-India release later that year. Large quantities of
Breeder Seed of the parental lines of HHB67-Improved were
distributed by ICRISAT and Haryana Agricultural University in 2005-06 to
public and private seed agencies, sufficient to sow more than 50,000 ha
with Certified Hybrid Seed of HHB67-Improved during the 2006 rainy
season. Provision of this initially free Breeder Seed to the seed industry
resulted in its widespread adoption in drier parts of Rajasthan and
Haryana, replacing the original HHB67 variety [5.1].
In 2008, large-scale seed production of affordable HHB67-Improved
was taken up in Nizamabad and Kurnool districts of Andhra Pradesh. Seed
production has continuously increased, reaching 3491 t in 2010/11. Over
1.1M packets of seed were produced that year and over 900,000 sold in
Rajasthan alone, demonstrating its growing, phenomenal rate of adoption by
the seed industry and farmers across North-Western India. This replaced
the original HHB67 variety, the seed production of which had risen
from 81 t in 1991 to a peak production of 2835 t in 1999, but by 2008 was
no longer in the production chain because of increased susceptibility to
downy mildew [5.2]. By this time it had been effectively replaced by the
downy mildew resistant and higher yielding HHB67- Improved,
allowing farmers to continue to grow this unique very early maturing
hybrid.
Impact on measures of improved international food security,
increased production and economic value to farmers and their
families
In Rajasthan and Haryana states, the area of HHB67-Improved
cultivation increased from 47,000 ha in 2006, to 875,000 ha in 2011, an
increase from 0.2% to 4.4% of the total Indian pearl millet area in just 3
years [5.1]. Such vast expansions of growth reflect the popularity of the
new variety.
Based on an average farm size of 2 ha, supporting a family of eight
[5.3], HHB67-Improved has brought greater food security to
approximately 3 million people in North-West India, in particular
resource-poor farmers whose cultivation of the original variety HHB67
left their food security highly vulnerable to downy mildew. Compared with
the original HHB67, HHB67-Improved provides larger grain
yields (about 10%), worth £2.6M per year in central and western parts of
Rajasthan. Its improved downy mildew resistance has prevented losses of
over £7M: the expected costs in the first year of a major downy mildew
outbreak (assuming 30% loss in harvest from 550,000 ha, yielding 700 kg/ha
and a grain price of Rs 5/kg) [5.2, 5.4]. Compared with HHB67 and
other local varieties in Rajasthan and Haryana, HHB67-Improved
gave a net benefit of Rs 544M (£6.5M) in 2011 alone [5.1]. The higher
yield and early maturity of this staple also released land for crop
diversification with sesame and food legumes. Furthermore, HHB67-Improved
enabled farmers to continue with the advantageous practice of the
cultivation of a second crop, like wheat or chickpea, during the
post-rainy season, thus effectively transforming single-crop lands into
two-season multicrop fields. This doubled cropping intensity provides
resilient farming systems, substantially increased income and improved
nutrition compared with systems based on the previously grown pearl millet
landraces [5.1, 5.4].
Commercial impact for those involved in seed production and
improved measures of gender equality
In addition to direct benefits to grain farmers, the production of hybrid
seed benefits a whole industry of irrigated seed producing farmers who, on
average, see 12 times higher net returns than rainfed grain and stover
farms. In 2011, the production of HHB67-Improved seed gave a net
income of Rs 300M (£3.6M) to the seed producers in Andhra Pradesh [5.1]
and further generated 186 person days per ha of employment, resulting in a
total of 900,000 person days of employment in 2011 alone, of which 45%
comprised women labourers [5.1, 5.4]. Women hired in seed production
account for twice the total labour days of men, demonstrating the improved
gender equality and significant increase in employment opportunities for
women in seed production regions and villages resulting from the improved
hybrid availability [5.1]. As seed production takes place at times and in
regions different to the main millet harvest, these benefits reach
additional households [5.3].
Sources to corroborate the impact
5.1. Harinarayana, G. 2012. Impact assessment of pearl millet hybrids
HHB67 and HHB67- Improved on production in North-West India. Executive
summary. International Crops Research Institute for the Semi-Arid Tropics
(ICRISAT), Patancheru, India.
5.2. ICRISAT. 2009. Pearl Millet Hybrid "HHB67-Improved" Developed
using MAS, resists downy mildew save millions in crop losses.
Documentation. International Crops Research Institute for Semi-Arid
Tropics, Patancheru, Andhra Pradesh, India. Available on the ICRISAT
website: http://oar.icrisat.org/5661/1/HHB67_Flyer_2009.pdf
5.3. Hash C.T., Yadav R.S. 2011. Creating genetic markers to breed downy
mildew and drought resistance in pearl millet. New Agriculturist,
Available at: https://www.gov.uk/government/case-studies/dfid-research-creating-genetic-markers-to-breed-downy-mildew-and-drought-resistant-pearl-millet
5.4. The Jewels of ICRISAT.2012., 72 pages. Including Extra-early pearl
millet hybrid, pp. 36-39. www.icrisat.org/icrisat-jewels.htm
www.icrisat.org/jewels/The-Jewels-of-ICRISAT.pdf?id=0B2XKK7agt0dCeFBsZk5EOHZ6NXM
5.5. "HHB67-Improved"-The first product of marker-assisted crop breeding
in India. Asia-Pacific Consortium on Agricultural Biotechnology (APCoAB).
2010. E-News available at: http://www.apcoab.org/uploads/files/1276753523hhb7_pub.pdf