Novel and sustainable control of two major fungal diseases of a world commodity crop.
Submitting Institution
University of BathUnit of Assessment
Biological SciencesSummary Impact Type
EconomicResearch Subject Area(s)
Biological Sciences: Microbiology, Plant Biology
Summary of the impact
Strategies have been developed to combat two fungal diseases that can
devastate production of palm oil, a world commodity supplying 40% of world
vegetable oil and valued at $46 Bn (USD):
(i) A novel fungicide treatment was designed to eradicate from seeds Fusarium,
a lethal fungal pathogen in Africa (responsible for yield losses of up to
54% prior to death of infected palms), and prevent inter-continental
disease spread.
(ii) Improved disease resistance screening for Ganoderma, the
second major pathogen, found in South East Asia and responsible for
estimated losses of £2Bn per annum in Malaysia alone, continues to
identify disease-resistant lines for cultivation. Through collaborative
projects, these strategies have been adopted as industry standards in
Ghana, Congo, Malaysia and Indonesia. These sustainable approaches to
disease control provide increased turnover and sales, and enhance food
security at both local and international levels.
Underpinning research
In Africa, the centre of origin of oil palm, a soil-borne fungal pathogen
Fusarium, has caused enormous yield losses (see Section 4) resulting
in reduced calorific intake to villagers, and reduced profits to oil
palm-producing companies and smallholders. Consequently, the productive
oil palm regions have moved to Malaysia (2012 palm oil value approximately
£14 Bn) and Indonesia, that combined produce 86% of world palm oil. The
Bath team led by Dr Richard Cooper initially revealed (1994) that Fusarium
can be found inside as well as on oil palm seeds in Africa [1]. Genetic
analysis of Fusarium isolates in 1993 revealed outbreaks in South
America originated from seed exported from Ivory Coast [2]. This finding
resulted in implementation of seed quarantine to detect Fusarium.
The pressing need to eradicate the pathogen from seeds led to
identification of a suitable fungicide, but seed immersion proved
ineffective against Fusarium inside seeds. The Cooper laboratory
showed in 1994 that vacuum infiltration allowed fungicide penetration
through seed germ-pores and eliminated Fusarium [1]. The
application of this approach by industry and for seed quarantine is
detailed in Section 4.
In South East Asia, crop monoculture has resulted in emergence of another
devastating fungal disease, basal stem rot caused by Ganoderma
[3-5]. The only effective solutions are to (a) detect and utilize disease
resistance and (b) prevent disease spread [5]. Disease resistant palm
lines are required to prevent loss of yield or death of trees. Identifying
resistance requires defined conditions and detailed knowledge of
infection. The Bath group radically improved screening in Indonesia by (a)
standardizing the methodologies for resistance screening and (b) shading
inoculated seedlings. We showed that shading mimics that provided by the
palm canopy and prevents soil overheating in the tropical sun.
Temperatures of exposed soil can exceed 40oC which inhibits or
kills the pathogen (resulting in false negative screening results) [3].
The widespread uptake of this adaptation is described in Section 4.
Key members of the Cooper laboratory:
Post-doctoral Dr J. Flood (1983-1994); research assistant, Dr R. Mepsted
(1988-1994); post-graduates, A. Buchanan (1997-2000), R.W. Rees
(2002-2005), M. H. Rusli (2008-2012), M. A. Wahab (2011-2014). No other UK
institution is working in this area.
References to the research
[1] Flood, J., Mepsted, R.,Cooper, R.M. (1994) Population dynamics
of Fusarium species on oil palm seeds following chemical and heat
treatments. Plant Pathology 43, 177-182. DOI:
10.1111/j.1365-3059.1994.tb00568.x
[2] Flood, J., Whitehead, D.S., Cooper, R.M. (1992) Vegetative
compatibility and DNA polymorphisms in Fusarium oxysporum f.sp. elaeidis
and their relationship to isolate virulence and origin. Physiological
and Molecular Plant Pathology. 41, 201-215. DOI:
10.1016/0885-5765(92)90011-J
[3] Rees, R. W., Flood, J., Hasan, Y., Cooper, R. M. (2007).
Effect of inoculum potential, shading and soil temperature on root
infection of oil palm seedlings by the basal stem rot pathogen Ganoderma
boninense. Plant Pathology 56, 862-870. DOI:
10.1111/j.1365-3059.2007.01621.x
[4] Rees, R. W., Flood, J., Hasan, Y., Potter, U., Cooper, R. M.
(2009). Basal stem rot of oil palm (Elaeis guineensis); mode of
root infection and lower stem invasion by Ganoderma boninense. Plant
Pathology 58, 982-989. DOI: 10.1111/j.1365-3059.2009.02100.x
[5] Rees, R. W., Flood, J., Cooper, R. M. 2012. Ganoderma
boninense basidiospores in oil palm plantations: evaluation of their
possible role in stem rots of oil palm (Elaeis guineensis). Plant
Pathology 61, 567-578. DOI: 10.1111/j.1365-3059.2011.02533.x
Details of grants and studentships that have supported this work:
£ 84,000 Malaysian Ministry Education 2011-2014; Epidemiology &
control of Ganoderma.
£ 113,500 Malaysian Palm Oil Board 2008-2012 and 2013; Fusarium
detection and resistance.
£ 2,000 FELDA/FASSB 2011; Training for 3 months for research staff on Ganoderma.
£ 98,000 Agrinos; Research included novel soil treatment for Fusarium
of oil palm.
£ 50,000 BBSRC (Industrial CASE: LONSUM &CABI) 2002-2005; Resistance
to Ganoderma.
£ 40,000 BBSRC (Industrial CASE with PBI Cambridge) 1997-2000; Palm
resistance genes.
£ 84,900 EU. 1994-1997; Optimization of oil palm breeding techniques to
control Fusarium.
£ 265,400 Unilever Plantations & Plant Science Group, total from
several grants between 1991-1994; Resistance to Fusarium.
£37,373 EU 1990-1993; Oil palm defence mechanisms to Fusarium
oxysporum.
Details of the impact
Background
Commercial oil palm is a world commodity providing around 40% of world
vegetable oil, valued at $46 billion (USD), but is constrained by the two
fungal diseases caused by Fusarium and Ganoderma. Palm oil
is important globally for human nutrition and as an income generator at
local and national levels (80% for food purposes, remainder includes
biodiesel and detergents). The prevention of these diseases and
development of resistance to them also has significant quality of life
benefits for the sustainable existence of smallholders and alleviating
rural poverty. Approximately 40% of the total area under oil palms in
Malaysia is run by an estimated 500,000 smallholders on very low incomes
(FELDA [A]). In Indonesia where >17% are below the poverty line, 41% of
plantations are owned by smallholders. The industry there employs
approximately 2 million people [B].
Past yield losses from Ganoderma have been estimated at 19-46% in
Malaysia and in 85% death of mature palms in Indonesia [C]. One estimate
gives annual losses in Malaysia as £2 Bn (Malaysian Palm Oil Board; MPOB
[A]). Fusarium wilt in Africa reduces yield by 30-54% before the typical
death of the palm [D]. The gain from disease prevention and control is
clearly considerable. The control methods described are sustainable and
bring environment benefits.
Impact from Fusarium research
1. Improving the performance of existing businesses: efficiency,
throughput, seed sales and prices. Seed treatment as developed at Bath and
patented [E] is currently adopted by two main companies:
(i) Feronia in Democratic Republic of Congo (DRC), since 1911 one
of the largest palm oil producers in Africa with 107,892 hectares and
around 400 employees. The Feronia website refers to, "In a
joint research project with Bath University, Yaligimba Research Station
[DRC] developed a technique which removes all fungi including
Fusarium spores, even those between the kernel and shell. The seed is
subjected to this special treatment prior to export." [F].
(ii) Ghana-Sumatra (CSIR-OPRI) in Ghana, who have an extensive
collection of oil palms gathered from wild populations in the region.
Ghana Sumatra is a seed company recently set up as the research link with
LONSUM, Indonesia [A]. Ghana-Sumatra commented:
"A market lead for seed sales is given by certifying our seed is
Fusarium-free; at our request he [R Cooper] adapted and shipped
equipment in 2011; it is currently treating 2 million seeds p.a;
treatment has allowed a price increase of 15%". [F].
Also the method is used by CABI-Europe-UK who provide seed quarantine for
shipments exported from Africa, because the pathogen is not found in South
East Asia or most of South America [A]. This creates an effective
intercontinental barrier to disease spread. CABI-Europe-UK has been
charging for seed quarantine service between other countries and S E Asia
for more than a decade. They state "The current methodology used at
CABI E-UK is an adaptation of...this technique initially developed in
1994 by research staff in Dr Cooper's laboratory" [F].
2. Delivery of highly skilled people:
a) A main team member into a global role: Dr Julie Flood was a member of
the Cooper laboratory for about 11 years working on Fusarium, then
secured a position with Centre for Agricultural Biosciences International
(CABI) and is now Global Director-Commodities [A].
b) A Malaysian researcher into a key country position: M. Rusli trained
at Bath in Fusarium research; employed in 2012 by MPOB in oil palm
biosecurity, in particular to prevent Fusarium.
3. Technology Transfer:
In 2011 apparatus was designed in the Bath laboratory to handle thousands
of seeds per treatment and sent to Ghana (Oil Palm Research Institute). A
visit there by Cooper in 2010 demonstrated superior methods for sampling
and screening palms for Fusarium infection [G].
Impact from Ganoderma research
As a direct result of our work [3], shading is used routinely in Sumatra
and Malaysia when testing for oil palm disease resistance by inoculating
with Ganoderma. Earlier work by us led to introduction of shading
also to DRC for screening for Fusarium resistance, as this
pathogen is also inhibited or killed at high temperatures [H]. Specific
forms of impact include:
1. A change of practice in the way organisations test for disease
resistance: Shading of seedling palms to maintain ambient soil
temperatures has been introduced by various companies including LONSUM,
Indonesia; FELDA/FASSB, Malaysia. LONSUM commented: "Dr Cooper
and his team made a discovery that has markedly improved our ability to
inoculate and select for disease resistance to Ganoderma. Shading is now
used routinely for nursery screening; their finding allowed development
of a fast screening test; results correlate with long term field trials;
Ganoderma threatens sustainability of S E. Asian oil palm industry; up
to 87% of palms may be lost" [F].
FELDA stated:
"..650,000 ha of oil palm [is grown] in FELDA; BSR [Ganoderma]
results in estimated loss of USD 6.6 million p.a; following a discovery
in Dr Cooper's laboratory we now use artificial shading routinely in
resistance screening; shortens duration from 12 to 8 months; number of
progenies tested increased significantly" [F].
2. Progress towards sustainable development:
Efficient screening for resistance to Ganoderma is revealing
resistant palm lines [I]. Fungicide use would cease, reducing pollution in
environmentally sensitive tropical locations.
Dr Cooper's role and wider impact of oil palm pathology research
- Research investment from and collaboration with overseas
businesses (see funding, Section 3): LONSUM (2002-2005) and FELDA (2011)
funded research on Ganoderma and Agrinos (2010) on Fusarium
control; collaboration is ongoing also with Sime Darby Ltd., another
major player in palm oil production and with Applied Agricultural
Resources (AAR) [G]. LONSUM is the 2nd largest public listed
plantation company in Indonesia, with 81,000 ha dedicated to oil palm,
sale of 26.4 million seeds and 2.3 million tonnes of palm fruit in 2011.
FELDA, founded to resettle rural poor and organize smallholder farms,
cultivates >650,000 ha of oil palms (approximately 18% of total
Malaysian oil palm area), has >600 employees and is the world's
largest producer of certified, sustainable oil palm (Financial Times,
2012) [A].
- Research investment and collaboration with government organisations:
The MPOB, the overarching advisory organisation [A], funded Fusarium
research (2008-2012 and 2013), and Ministry of Higher Education Ganoderma
research (2011-2014). Also MPOB sponsored field studies in South America
(2012) to assess a major palm disease (Phytophthora) in the
context of quarantine to prevent spread to South East Asia [G].
- Invitation onto advisory panels:
FELDA and MPOB invited Dr Cooper to be a member of their international
advisory panels (2011-2014) involving annual visits to Malaysia [G].
- Knowledge transfer:
During 2009-2013 Dr Cooper delivered 18 invited seminars on Fusarium
and/or Ganoderma control to non-academic stake-holders,
including growers, companies and researchers in Malaysia, Indonesia,
Ghana and Brazil, Two lectures were to audiences of >600; two talks
were published as reviews in a professional journal for S E Asia [H].
Additionally, two workshops were held (Malaysia and Brazil) based around
these invited presentations. The companies involved included FELDA, Sime
Darby, Agrinos, Agropalma, Marborges and Denpasar; government
organisations were MPOB, EMBRAPA, Oil Palm Research Institute (Ghana)
and IOPR Indonesia [A].
Sources to corroborate the impact
(A) Company and organisation websites
Feronia: www.feronia.com/oil-palm/seed-farming/
LONSUM: www.londonsumatra.com/
FELDA: www.felda.net.my/ fssb
MPOB: www.mpob.gov.my/ http://www.palmoilhq.com/PalmOilNews/world%E2%80%99s-single-largest-palm-oil-event-
Agrinos: http://sea.agrinos.com/pt-br/node/529
CABI: http://www.cabi.org/?site=170&sid=1834&page=1019
Ghana Sumatra (CSIR-OPRI): http://www.ghanasumatra.com/products.php
IOPRI Yogyakarta: r4d.dfid.gov.uk/PDF/Outputs/CABI/Ganoderma-Diseases.pdf
Applied Agricultural Resources (AAR) www.aarsb.com.my
(B) Indonesian palm oil benefits: http://worldgrowth.org/site/wpcontent/uploads/2012/06/WG_Indonesian_Palm_Oil_Benefits_Report-2_11.pdf
(C) Chung Gait Fee (2011). The Planter 87: 325-339.
(D) Corley R H V,Tinker P B (2003). The Oil Palm 4th Edition.
Oxford: Blackwell Publishing.
(E) Patent: Cooper, R.M., Flood, J. and Mepsted, R. Disinfestation of oil
palm seed. (1993) "Fungicide Treatment of Oil Palm Seeds" GB PATENT
9300 142.8. International (PCT).
(F) Testimonials from FELDA, LONSUM, Ghana Sumatra and CABI, UK
(G) Documents, e mail confirmations of: advisory panels; presentations;
ongoing collaborations.
(H) Cooper, R. M., Flood, J., Rees, R. W. (2011). Ganoderma boninense
in oil palm plantations: current thinking on epidemiology, resistance and
pathology. The Planter 87, 515-526. Cooper, R.M. (2011) Fusarium
wilt of oil palm: a continuing threat to the Malaysian oil palm industry.
The Planter 87, 409-418. (Invited articles for this professional
journal for SE Asia).
(I) http://palmoilis.mpob.gov.my/publications/jopr2006sp-ms24.pdf.