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Researchers from the University of Oxford identified the novel human protein Forkhead box transcription factor 1 (FOXP1) and showed it to be an important prognostic biomarker in cancer. Expression of FOXP1 can distinguish those patients with diffuse large B-cell lymphoma (DLBCL) who are at high risk of disease progression, making it possible for clinicians to target more intensive therapy to this group. DLBCL accounts for one third of lymphomas and is the seventh commonest form of cancer. The anti-FOXP1 monoclonal antibody developed by Oxford University is now used worldwide in clinical diagnostics.
The CATH classification of protein structure, developed at the Institute of Structural and Molecular Biology, UCL, by Janet Thornton and Christine Orengo, has been used widely across the pharmaceutical industry and academia to guide experiments on proteins. This has led to significant cost and time savings in drug discovery. The UCL-hosted online CATH database receives around 10,000 unique visitors per month, and is a partner in InterPro — the most frequently accessed protein function annotation server available.
Novel rapid methods for predicting protein structure, particularly functional loop structures, have been developed by researchers at the University of Oxford. These have been made accessible to a large audience through a suite of computational tools. The methods have had general impact through download and online access and specific impact through extensive use within UCB Pharma. The tools are much faster than other methods, creating equal or better predictions in approximately a thousandth of the time. Commonly exploited by UCB Pharma in their drug discovery pipeline, they have cut computational cost, but, more importantly, they have greatly reduced the time for process improvements. UCB Pharma estimate that the tool pyFREAD alone saves over £5 million in the discovery costs for a single drug molecule. FREAD (a version of pyFREAD coded in C) is also being used more widely, for example by Crysalin Ltd and InhibOx.
Sumbayev and colleagues have shown that gold nanoparticles represent an excellent platform for the specific delivery of drugs, targeting the HIF-1 biochemical pathway as a novel therapeutic target for diseases such as allergy, leukaemia and other autoimmune disorders. Two international, non-academic institutions have altered the direction of their work as a result of this research and two SMEs have revised their operational procedures and invested in the applied research that derives from this work.
Impact: EaStCHEM spin out Albachem (1994), subsequently incorporated into the Almac group, enabling the latter company to become a world leader in the provision of chemically synthesised proteins.
Significance: Chemical synthesis is competitive with recombinant methods for commercial production of the therapeutic polypeptides that represent ~50% of drugs in big pharma pipelines and have a market value in 2008 of over $13B. The value attributable to Ramage's methods for polypeptide syntheses over the REF period is estimated at approximately £6M.
Beneficiaries: Drug manufacturers, contract research organisations, patients, clinicians.
Research: Studies (1993-6) led by Ramage (at the University of Edinburgh) on new methods for high-yield total syntheses and purification of long polypeptides.
Reach: Almac's protein-manufacturing team remains in the UK with 24 staff members. The Almac Group, headquartered in N. Ireland, has 3300 employees globally (1300 outside UK) and sells to 600 companies worldwide.
Professor Dickson's research group at Royal Holloway has pioneered the enabling technologies for the development of genetic therapies for the incurable disease Duchenne Muscular Dystrophy (DMD). Dickson's group has, (i) cloned replacement copies of the normal DMD gene, (ii) identified a natural substitute for the defective gene, and (iii) demonstrated that synthetic DNA can be used to correct the defective gene. The work has created impact on health and welfare through the development and clinical trials of a series of investigational medicinal products for this hitherto incurable disease, several clinical trials, and impact on commerce through industrial investment and licensed patents.
Members of the Pharmacology Research Group identified hitherto unknown properties of G protein Coupled Receptors (GPCRs): that ligands can signal differentially through both G-protein-coupled and β-arrestin pathways. This led to the concept of GPCR `biased signalling' and development of fluorescent reporters to quantify β-arrestin signalling. These discoveries have been adopted widely by the pharmaceutical industry, attracting R&D investment and collaborative research funding, to drive discovery of new drugs operating through `biased signalling'. The commercial opportunity has also been exploited by screening reagent providers and contract screening organisations. These discoveries will ultimately produce better drugs to treat GPCR-based diseases to improve human health.
A portfolio of Oxford University research, relating to the chemistry of natural products extracted from plants, has formed the basis of a substantial and multifaceted programme of outreach activity targeted at schools and the general public from 2011-2013. Research students and staff have collaborated with the Oxford University Botanic Garden to deliver multiple events including a poster exhibition, an audio trail, interactive guided walks and a `solar fuels' stand at the prestigious 2013 Royal Society Summer Science Exhibition, with the emphasis on face-to-face in-depth interaction where possible and a strong link to Oxford Chemistry research. The events have educated thousands of people and helped to inform their views on, and enthusiasm for, plant-related chemistry. They have also engaged the interest and support of industry.
Research at the University of Oxford's Glycobiology Institute (OGBI) has led to the development of `state-of-the-art' platform technologies for the analysis of oligosaccharides (sugars) that are linked to proteins and lipids. These enabling technologies have had major impacts worldwide on drug discovery programmes, have enabled robust procedures to be developed for the quality control of biopharmaceutical production, and have been widely adopted by the pharmaceutical industry.
From 1993 to 2005, Professor Errington and his colleagues at the University of Oxford addressed the increasingly serious global emergency of treating antibiotic-resistant bacteria. Their research led to the establishment in 1998 of the university spin-out company Prolysis Ltd and the discovery and development of two innovative series of antibiotics. The success of Prolysis Ltd was confirmed in 2009 when it was acquired by Biota Europe for £6.4 million, and gained an additional investment of £14.9 million. The subsequently formed Biota Pharmaceuticals Inc. continues to support the development of innovative broad-spectrum antibiotics essential to combat antibiotic-resistant bacteria.